FFCP PHASE1:Hg19::chr15:31393917..31393936,-
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| Short description: | p1@TRPM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TRPM1_5end |
| Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
| Association with transcript: | 0bp_to_ENST00000256552, ENST00000559179, NM_001252024, NM_001252030, NM_002420, uc001zfm.2, uc001zfn.3_5end |
| EntrezGene: | TRPM1 |
| HGNC: | 7146 |
| UniProt: | F8W865Q6PE48Q7Z4N2 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@TRPM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pigment cell | 1.65e-68 | 14 |
| melanocyte | 1.67e-51 | 10 |
| melanoblast | 1.67e-51 | 10 |
| visual pigment cell | 1.20e-32 | 4 |
| light melanocyte | 1.45e-25 | 3 |
| neurecto-epithelial cell | 2.86e-25 | 20 |
| retinal pigment epithelial cell | 1.12e-24 | 3 |
| columnar/cuboidal epithelial cell | 1.88e-18 | 27 |
| ecto-epithelial cell | 1.96e-14 | 34 |
| migratory neural crest cell | 3.47e-11 | 41 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| retina | 2.88e-33 | 6 |
| photoreceptor array | 2.88e-33 | 6 |
| posterior segment of eyeball | 2.88e-33 | 6 |
| layer of retina | 5.16e-32 | 4 |
| pigmented layer of retina | 1.12e-24 | 3 |
| presumptive retinal pigmented epithelium | 1.12e-24 | 3 |
| eye | 2.44e-13 | 21 |
| visual system | 2.44e-13 | 21 |
| sense organ | 1.30e-11 | 24 |
| sensory system | 1.30e-11 | 24 |
Showing 1 to 10 of 34 entries
